Featured Articles | Journal of Nucleic Acids Investigation

Current Issue

3 December 2024

View this Issue

Featured Articles

Published: 3 December 2024

The Journal of Nucleic Acids Investigation (JNAI) is an Open Access, peer-reviewed journal that publishes original articles, letters, protocols, and reviews on all aspects of nucleic acids pre-clinical and translational research.

microRNAs and cancer

MicroRNAs, SNPs and cancer

Angela V. Vitale, Huiping Tan, Peng Jin

https://doi.org/10.4081/jnai.2236

4390

PDF: 575

HTML: 525
- PDF
- HTML
MicroRNAs as biomarkers for the diagnosis and prognosis of human cancer

Daniela Asslaber, Josefina Piñón Hofbauer, Richard Greil, Alexander Egle

https://doi.org/10.4081/jnai.2130

3992

PDF: 640

HTML: 3280
- PDF
- HTML
Expression of microRNA during bovine adipogenesis

Scott L. Pratt, T. Ashley Burns, Erin Curry, Susan K. Duckett

https://doi.org/10.4081/jnai.1872

7550

PDF: 0

HTML: 5460

Supplementary data table: 170
- PDF
- HTML
Non-coding RNAs and cancer: microRNAs and beyond

Rachel Marie Raia, George Adrian Calin

https://doi.org/10.4081/jnai.2305

4201

PDF: 647

HTML: 2056
- PDF
- HTML
Molecular markers for prediction of risk of radiation-related injury to normal tissue

Marco Ghilotti, Marco Alessandro Pierotti, Manuela Gariboldi

https://doi.org/10.4081/jnai.2055

4763

PDF: 756

HTML: 9075
- PDF
- HTML
Online resources for microRNA analysis

Panagiotis Alexiou, Manolis Maragkakis, Artemis G Hatzigeorgiou

e4

https://doi.org/10.4081/jnai.2161

4250

PDF: 565

HTML: 1590
- PDF
- HTML
MicroRNAs in mouse models of lymphoid malignancies

Nicola A.O. Zanesi, Yuri Pekarsky, Francesco Trapasso, George Calin, Carlo M. Croce

https://doi.org/10.4081/jnai.1727

1623

PDF: 685

HTML: 1080
- PDF
- HTML
Therapeutic implications of microRNAs in human cancer

Michael Rossbach

https://doi.org/10.4081/jnai.2200

5998

PDF: 1153

HTML: 2284
- PDF
- HTML
Role of microRNAs in solid tumors

Rie Hamano, Hideshi Ishii, Hiroshi Miyata, Yuichiro Doki, Masaki Mori

https://doi.org/10.4081/jnai.2164

11273

PDF: 710

HTML: 9332
- PDF
- HTML
Body fluid micro(mi)RNAs as biomarkers for human cancer

Edward R. Sauter, Neel Patel

https://doi.org/10.4081/jnai.2160

5143

PDF: 839

HTML: 2340
- PDF
- HTML
Role of microRNAs in the molecular diagnosis of cancer

Simona Giglio, Andrea Vecchione

https://doi.org/10.4081/jnai.1659

1227

PDF: 646

HTML: 8209
- PDF
- HTML

Articles

A new entropy model for RNA: part I. A critique of the standard Jacobson-Stockmayer model applied to multiple cross links

Wayne Dawson, Kenji Yamamoto, Gota Kawai

https://doi.org/10.4081/jnai.2650

4839

PDF: 635

APPENDICES: 18
- PDF
- APPENDICES
A new entropy model for RNA: part II. Persistence-related entropic contributions to RNA secondary structure free energy calculations

Wayne Dawson, Kenji Yamamoto, Kentaro Shimizu, Gota Kawai

https://doi.org/10.4081/jnai.2651

4126

PDF: 712

APPENDIX: 271
- PDF
- APPENDIX
A new entropy model for RNA: part III. Is the folding free energy landscape of RNA funnel shaped?

Wayne Dawson, Toshikuni Takai, Nobuharu Ito, Kentaro Shimizu, Gota Kawai

https://doi.org/10.4081/jnai.2652

5201

PDF: 1054
- PDF
A new entropy model for RNA: part IV, The Minimum Free Energy (mFE) and the thermodynamically most-probable folding pathway (TMPFP)

Wayne Dawson, Gota Kawai

https://doi.org/10.4081/jnai.2653

1860

PDF: 854

Supplement S2: Methods: the vsfold5 algorithm: 114

Prediction of RNA Pseudoknots Using Heuristic Modeling with Mapping and Sequential Folding: 150
- PDF
A new entropy model for RNA: part V, Incorporating the Flory-Huggins model in structure prediction and folding

Wayne Dawson, Gota Kawai

https://doi.org/10.4081/jnai.2657

1868

PDF: 1239
- PDF
Computational prediction of candidate miRNAs and their targets from the completed Linum ussitatissimum genome and EST database

Tiffanie Y. Moss, Christopher A. Cullis

https://doi.org/10.4081/jnai.4150

3565

PDF: 722

Supplementary Files: 28
- PDF
- Supplementary Files
The effect of in vitro exposure to antisense oligonucleotides on macrophage morphology and function

Ann Brasey, Raouf Igue, Loubna Djemame, Serge Séguin, Paolo Renzi, Nicolay Ferrari, Rosanne Seguin

https://doi.org/10.4081/jnai.3515

1627

PDF: 623
- PDF
Unusual 5'-regulatory structure and regulation of the murine Mlc1 gene: lack of promoter-specific functional elements

Darja Henseler, Jonathan D. Turner, Matthias Eckhardt, Maaike van der Mark, Yanina Revsin, Michelle K. Lin, Thorsten Kranz, Claude Muller, Jobst Meyer

https://doi.org/10.4081/jnai.2314

1993

PDF: 682
- PDF
Development of network inference among LexA/RecA-dependent manner genes in the SOS response

Sachiyo Aburatani

https://doi.org/10.4081/jnai.1871

2010

PDF: 551

HTML: 1334

Supplementary data table: 139
- PDF
- HTML
Silencing of hpv16 e6 and e7 oncogenic activities by small interference RNA induces autophagy and apoptosis in human cervical cancer cells

Jonathan Salazar-León, Fabiola Reyes-Román, Angélica Meneses-Acosta, Horacio Merchant, Alfredo Lagunas-Martínez, Elizabeth Meda-Monzón, María Luisa Pita-López, Claudia Gómez-Cerón, Victor Hugo Bermúdez-Morales, Vicente Madrid-Marina, Oscar Peralta-Zaragoza

https://doi.org/10.4081/jnai.2583

2929

PDF: 776

Supplementary Table 1: 121

Supplementary Figure 1: 80
- PDF
GyrB vs. 16s rRna sequencing for the identification of Campylobacter jejuni, Campylobacter coli, and Campylobacter lari

Nereus William Gunther IV, Jonnee Almond, Xianghe Yan, David S Needleman

https://doi.org/10.4081/jnai.2303

5240

PDF: 750

HTML: 2492
- PDF
- HTML
FHIT suppresses inflammatory carcinogenic activity by inducing apoptosis in esophageal epithelial cells

Koshi Mimori, Takehiko Yokobori, Masaaki Iwatsuki, Tomoya Sudo, Fumiaki Tanaka, Kohei Shibata, Hideshi Ishii, Masaki Mori

https://doi.org/10.4081/jnai.1460

905

PDF: 604

HTML: 1412
- PDF
- HTML
A novel detection method for heteroduplex DNA using carbodiimide-induced interrupted primer extension

Tania Tabone, Richard Cotton, Ninan Mathew, J. Des Parkin, Judy Savige

https://doi.org/10.4081/jnai.1577

1204

PDF: 569

HTML: 11442
- PDF
- HTML
Robust hybridization-based genotyping probes for HPV 6, 11, 16 and 18 obtained via in vitro selection

Ivan B. Brukner, Anne-Marie Larose, Izabella Gorska-Flipot, Maja Krajinovic, Damian Labuda

https://doi.org/10.4081/jnai.1491

1430

PDF: 675

HTML: 4546
- PDF
- HTML
The mitochondrial housekeeping gene 16S is inappropriate as an internal standard in comparative studies of rare mitochondrial transcripts using S1-nuclease protection assays

Sandra Ebert, Line Breumlund, Roland Nau, Uwe Michel

https://doi.org/10.4081/jnai.1588

1490

PDF: 552

HTML: 5163
- PDF
- HTML

Reviews

P53 and microRNAs in chronic lymphocytic leukemia

Johannes Bloehdorn, Christian Langer, Hartmut Döhner, Thorsten Zenz, Stephan Stilgenbauer

https://doi.org/10.4081/jnai.2414

5435

PDF: 564

HTML: 4392
- PDF
- HTML
HER2 splice variants and their relevance in breast cancer

Marianna Sasso, Francesca Bianchi, Valentina Ciravolo, Elda Tagliabue, Manuela Campiglio

https://doi.org/10.4081/jnai.2454

3826

PDF: 1358
- PDF
High mobility group A-interacting proteins in cancer: focus on chromobox protein homolog 7, homeodomain interacting protein kinase 2 and PATZ

Monica Fedele, Giovanna Maria Pierantoni, Pierlorenzo Pallante, Alfredo Fusco

https://doi.org/10.4081/jnai.3988

4528

PDF: 693
- PDF
Predictive molecular markers for EGFR-TKI in non-small cell lung cancer patients: new insights and critical aspects

Paola Ulivi, Daniele Calistri, Wainer Zoli, Dino Amadori

e10

https://doi.org/10.4081/jnai.1805

1306

PDF: 611

HTML: 35266
- PDF
- HTML
Survival of the fittest or best adapted: HLA-dependent tumor development

Giuseppe V. Masucci, Emilia Andersson, Lisa Villabona, Hildur Helgadottir, Kjell Bergfeldt, Federica Cavallo, Guido Forni, Soldano Ferrone, Aniruddha Choudhury, Barbara Seliger, Rolf Kiessling

e9

https://doi.org/10.4081/jnai.1654

1949

PDF: 720

HTML: 3528
- PDF
- HTML
Cancer immunoediting and dioxin-activating aryl hydrocarbon receptor: a missing link in the shift toward tumor immunoescape?

Ruggero Ridolfi, Massimo Guidoboni, Laura Ridolfi

https://doi.org/10.4081/jnai.1724

1845

PDF: 647

HTML: 21065
- PDF
- HTML
Induced pluripotent stem cells: the long-expected revolution in medical science and practice?

Antonio Sorrentino

https://doi.org/10.4081/jnai.1625

1292

PDF: 653

HTML: 659
- PDF
- HTML

Protocols

A modified Phenol-chloroform extraction method for isolating circulating cell free DNA of tumor patients

Clemens Hufnagl, Markus Stöcher, Martin Moik, Roland Geisberger, Richard Greil

https://doi.org/10.4081/jnai.4282

10931

PDF: 2346
- PDF
Practical strategies for the evaluation of high-affinity protein/nucleic acid interactions

Sarah E. Altschuler, Karen A. Lewis, Deborah S. Wuttke

https://doi.org/10.4081/jnai.4646

4430

PDF: 1393
- PDF

© PAGEPress 2008-2025 • PAGEPress^® is a registered trademark property of PAGEPress srl, Italy • VAT: IT02125780185 • Privacy